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MPFE - Estimation of the amplicon methylation pattern distribution from bisulphite sequencing data
Estimate distribution of methylation patterns from a table of counts from a bisulphite sequencing experiment given a non-conversion rate and read error rate.
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highthroughputsequencingdatadnamethylationmethylseq
3.78 score 7 scripts 289 downloadspolyaAeppli - Implementation of the Polya-Aeppli Distribution
Functions for evaluating the mass density, cumulative distribution function, quantile function and random variate generation for the Polya-Aeppli distribution, also known as the geometric compound Poisson distribution. More information on the implementation can be found at Conrad J. Burden (2014) <arXiv:1406.2780>.
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1.00 score 7 scripts 262 downloads